5th SUSTAIN Training School: Mapping of Soil Salinity Changes using Remote Sensing and Machine Learning

Abstract

Soil salinity, driven by natural processes and human activities, is a critical environmental challenge undermining agriculture and ecosystem stability. Globally, about 955 million hectares of primary salt-affected soils and 77 million hectares of secondary salinization are degraded, with irrigated lands representing 58% of the latter. Despite reclamation efforts, salinity continues to expand, impacting nearly 20% of irrigated areas. Monitoring salinity dynamics is therefore vital for sustainable land management. Remote sensing provides effective tools to detect and track salinity through multitemporal optical and microwave satellite imagery. Recent advances in machine learning have strengthened mapping capacities, enabling precise classification, regression, and prediction of salt-affected soils. By integrating spectral, radar, and ancillary data with ground truth, these approaches generate reliable, scalable, and reproducible maps. This training school introduces participants to remote sensing and machine learning applications for soil salinity assessment. Learners will explore detection principles, practice satellite image interpretation, and apply feature engineering strategies. They will also experiment with machine learning models such as Random Forest, Support Vector Machines, gradient boosting, and deep learning baselines to evaluate salinity distribution across landscapes. The program combines theoretical lectures with hands-on exercises on real-world datasets, using open-source software and cloud platforms to ensure practical, transferable skills.

Learning outcomes:

At the end of the training, students will:

  • Understand the causes, processes, and impacts of soil salinity.
  • Explore remote sensing principles and satellite data sources relevant to salinity mapping.
  • Apply image-processing techniques to detect and characterize salt-affected areas.
  • Use machine-learning models to classify and predict soil salinity distribution.
  • Develop thematic maps and validate results with ground truth.

Prerequisites needed

Participants should have a foundation in environmental/agricultural sciences, some technical skills in GIS/data analysis, and openness to learning programming and machine learning applications.

Skills/equipment needed

Participants should bring a solid foundation in soil science, agronomy, or environmental studies, with basic knowledge of remote sensing and GIS tools (e.g., QGIS, ArcGIS). Introductory skills in statistics and data analysis are recommended, along with some programming literacy in Python or R for machine learning exercises. A collaborative mindset and English proficiency are essential for interactive sessions. Each participant must have a laptop (≥8 GB RAM) with reliable internet access.

For the field day, participants are advised to wear light clothing and closed shoes suitable for fieldwork. Sun protection including a hat and sunscreen and mosquito repellent are strongly recommended.

 Organizational details

  • Up to 15 trainees will be selected and financially supported (long distance travel and daily allowance) by SUSTAIN according to the Annotated Rules.
  • Please note that the participants are responsible to organize their flights, book their accommodation, visa, etc. on their own.
  • Participants will be accommodated at the Tunis Grand Hotel (https://www.tunis-grandhotel.com/en/). Preferential offers will be arranged in the framework of the training school. Participants who prefer to stay in a different hotel are requested to inform the local organizer, who will recommend an alternative address.
  • Manouba School of Engineering and the University of Manouba will arrange local transfers for participants, covering both airport–hotel connections and hotel–venue shuttles.

Applications are closed. Thank you for your interest

Agenda

DAY1. 21/04/2026
TimeProgram
8.00 - 8.30Participant registration
8.30-9.00Ice-Breaker Session
9.00-9.15Opening Session
9.45-10.30Panel/ COST actions: challenges and opportunities Panelists: Director of MSE, COST national coordinator (Ministry of Higher Education and Scientific Research), Sustain coordinators.
10.30Group Photo
10.35-11.00Coffee Break
11.00-12.00Session 1- Introduction and Background
- Soil salinity challenges in arid and semi-arid regions
- Environmental and agricultural impacts
- Role of Earth Observation and AI
- Overview of existing methods
12.00-13.00Session 2 – Remote Sensing Data for Salinity Mapping
- Sentinel-2, Landsat, MODIS
- Sentinel-1 (SAR)
- Spectral salinity indices
- Ancillary data sources
13.00-14.00Lunch
14.00-15.00Session 3 – Data Preprocessing and Feature Extraction
- Atmospheric correction
- Cloud masking
- Multi-sensor harmonization
- Google Earth Engine overview
15.00-16.00Session 4 – Hands-on Part 1
- Data access and visualization
- Index computation
- Exploratory analysis
16.00-17.00Visit of the City of Science Planetarium
19.00Networking Dinner
DAY2. 22/04/2026 (in the field)
TimeProgram
8.30-9.00Participant registration/Welcome coffee
9.00-10.00Session 5 – Machine Learning for Soil Salinity Mapping
- Regression problem formulation
- Random Forest, SVR, Gradient Boosting
- Deep learning overview
10..00-11.00Session 6 – Model Validation and Performance Assessment
- Field data
- Validation strategies
- Evaluation metrics
11.00-11.30Coffee break
11.30-12.30Session 7 – Hands-on Part 2
- Model training
- Salinity map generation
- Results analysis
12.30-13.00Session 8 – Case Studies and Future Perspectives
- Regional case studies
- Decision-support systems
- Research perspectives
13.00-14.30Lunch in Soliman City/Guided Walk Tour (Andalusian city)
14.30-16.00Stakeholder Workshop
16.00-17.00Poster Session
17.00Best Poster Award
17.30Closing Session/Certificate Distribution

Speakers Abstracts

 1) Introduction to soil salinity, sodicity and diagnostic techniques

Karim Ben Hamed

Manouba School of engineering (MSE), University of Manouba. Tunisia

[email protected]

Soil salinity and sodicity are among the most pervasive forms of land degradation threatening agricultural productivity and ecosystem resilience. Salinity results from the excessive accumulation of soluble salts, while sodicity arises from disproportionate sodium concentrations on soil exchange sites, leading to structural collapse and impaired infiltration. Accurate diagnosis is fundamental to management: electrical conductivity (EC) quantifies salinity, whereas sodium adsorption ratio (SAR) and exchangeable sodium percentage (ESP) are key indicators of sodicity. Complementary tools such as pH measurement, remote sensing, and geospatial analysis enhance monitoring across scales. This session outlines the definitions, impacts, and diagnostic thresholds of saline and sodic soils, emphasizing the integration of classical laboratory techniques with modern monitoring approaches to guide reclamation strategies and ensure sustainable agroecosystem management.

2) Artificial Intelligence supporting Earth Observation for climate change and environment analysis

Imed Riadh Farah

Manouba School of engineering (MSE)

[email protected]

The climate crisis is a present reality, marked by rapid ice loss, ocean warming, and extreme weather. While Earth observation (EO) systems generate vast data streams, the challenge lies in converting them into actionable knowledge for resilience. This talk highlights how Artificial Intelligence (AI) is transforming EO, bridging data and decision-making through applications such as extreme weather prediction, real-time wildfire and flood detection, optimized water use, and carbon mapping. Case studies include AI-driven precipitation–vegetation analyses in the Mediterranean and automated soil moisture tools for arid regions.  Remaining challenges—data gaps, interpretability, and computational costs—are addressed alongside future directions: hybrid physics–AI models, open data ecosystems, and sustainable AI. Together, AI and EO enable a paradigm shift toward proactive climate action.

 3) Machine Learning foundation

Mohamed Farah

Institut Supérieur des Arts et Métiers de la Manouba (ISAMM)

[email protected]

This course introduces the core concepts of machine learning for environmental and geospatial data. It covers data preparation, feature engineering, supervised learning (classification/regression), model selection, and evaluation metrics. Emphasis is placed on practical understanding of algorithms commonly used in Earth observation applications (e.g., Random Forest, SVM, Gradient Boosting).

 4) Machine Learning for Remote Sensing: Methods and use cases

Ali Ben Abbes

Manouba School of engineering (MSE)

[email protected]

 This course focuses on how machine learning is applied to remote sensing data (multispectral, SAR, and time series). Participants learn remote sensing feature extraction (spectral indices, texture, temporal descriptors), multi-sensor fusion principles, and typical pipelines for mapping and monitoring tasks. Use cases include vegetation stress, drought indicators, soil moisture proxies, and land degradation/salinity signals.

 5) Applications and case studies (Hands-on)

Manel Rhif

National School of Computer Science (ENSI)

[email protected]

This course is practice-oriented and built around real-world case studies. Participants develop end-to-end workflows: data access (e.g., Sentinel/Landsat), preprocessing, training ML models, generating thematic maps, and validating results with reference data. The course concludes with interpretation, reporting, and discussion of limitations, reproducibility, and deployment in decision-support contexts.

Speakers/Trainers/ (short biography)

 Imed Riadh FARAH (Male), Full Professor of Computer Science and a Senior Researcher with the Laboratory of research in software engineering and applied, distributed and intelligent informatics (RIADI). Since 2022, he has served as Head of the Manouba School of Engineering at the University of Manouba, Tunisia. From 2011 to 2016, he was Director of the Multimedia School. In recognition of his scholarly impact, he received the University of Manouba’s Local Researcher Award as the Most Cited Researcher in 2022. His research spans artificial intelligence, remote sensing, medical image processing, and pattern recognition.

Karim BEN HAMED (Male), Ph.D. in Biological Engineering, is Professor of Higher Education at the National School of Engineering of Manouba (MSE), University of Manouba. With over two decades of research experience at the Biotechnology Center of Borj Cédria (CBBC), he specializes in plant adaptation to salinity and halophytes and has authored more than 70 scientific publications. He has coordinated and contributed to international projects on soil remediation and saline resource valorization (PRIMA, Biodiversa+, COST, ICOOP, CMCU, among others). His teaching spans genetics, plant biology, ecotoxicology, and since 2024, courses in English on Biology, Ecophysiology, Biochemistry and Biotechnology at MSE. Beyond academia, he is actively engaged in Tunisian civil society through leadership roles in several environmental and community associations.

Ali BEN ABBES (Male) is an Assistant Professor of Computer Science and Director of Studies & Internships at the Manouba School of Engineering (MSE), Manouba University, Tunisia. His research focuses on GeoAI and Earth Observation, including drought forecasting, land-use and land-cover mapping, soil moisture estimation, and poverty/well-being mapping. He is actively involved in international collaborations and projects aligned with the UN Sustainable Development Goals, while teaching AI, data science, and image processing and supervising several PhD and engineering students.

Manel RHIF (Female) is an Assistant Professor of Computer Science at the National School of Computer Science(ENSI), University of Manouba, Tunisia. Her research focuses on GeoAI and Earth Observation, including drought forecasting and vegetation monitoring. She is actively involved in international collaborations and projects aligned with machine learning and remote sensing.

Mohamed FARAH (Male) is Associate Professor at the Higher Institute of Arts and Multimedia (ISAMM), University of La Manouba, Tunisia, and a researcher in the SIIVT team at the RIADI Laboratory. He holds a Habilitation Universitaire in Computer Science from ENSI (2019) and a Ph.D. from Paris Dauphine University (2006). His research focuses on Computer Vision, Artificial Intelligence, and Multimodal Data Fusion, with applications in Remote Sensing and Medical Imaging. His key interests include geospatial intelligence, traffic congestion prediction, brain disease detection using EEG, emotion recognition, protein modeling, dimensionality reduction, and explainable AI.

cost

COST

COST (European Cooperation in Science and Technology) is a funding agency for research and innovation networks. Our Actions help connect research initiatives across Europe and enable scientists to grow their ideas by sharing them with their peers. This boosts their research, career and innovation.

COST Action CA22144

Salinisation, the accumulation of water-soluble salts in the soil, is one of the major causes of soil degradation affecting 833 million hectares of land and 1.5 billion inhabitants worldwide. However, these lands can be used by applying saline agriculture, involving soil, water and salt-tolerant crop management methods.

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